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Computational image analysis reveals the structural complexity ofToxoplasma gondiitissue cysts

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2020
1043.pdf (1.377Mb)
Authors
Bauman, Neda M.
Ilić, Anđelija
Lijeskić, Olivera
Uzelac, Aleksandra
Klun, Ivana
Srbljanović, Jelena
Ćirković, Vladimir
Bobić, Branko
Štajner, Tijana
Đurković-Đaković, Olgica
Article (Published version)
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Abstract
Toxoplasma gondiiis an obligate intracellular parasite infecting up to one third of the human population. The central event in the pathogenesis of toxoplasmosis is the conversion of tachyzoites into encysted bradyzoites. A novel approach to analyze the structure ofin vivo-derived tissue cysts may be the increasingly used computational image analysis. The objective of this study was to quantify the geometrical complexity ofT.gondiicysts by morphological, particle, and fractal analysis, as well as to determine if it is impacted by parasite strain, cyst age, and host type. A total of 31 images ofT.gondiibrain cysts of four type-2 strains (Me49, and local isolates BGD1, BGD14, and BGD26) was analyzed using ImageJ software. The parameters of interest included diameter, circularity, packing density (PD), fractal dimension (FD), and lacunarity. Although cyst diameter varied widely, its negative correlation with PD was observed. Circularity was remarkably close to 1, indicating a perfectly rou...nd shape of the cysts. PD and FD did not vary among cysts of different strains, age, and derived from mice of different genetic background. Conversely, lacunarity, which is a measure of heterogeneity, was significantly lower for BGD1 strain vs. all other strains, and higher for Me49 vs. BGD14 and BGD26, but did not differ among Me49 cysts of different age, or those derived from genetically different mice. The results indicate a highly uniform structure and occupancy of the differentT.gondiitissue cysts. This study furthers the use of image analysis in describing the structural complexity ofT.gondiicyst morphology, and presents the first application of fractal analysis for this purpose. The presented results show that use of a freely available software is a cost-effective approach to advance automated image scoring forT.gondiicysts.

Source:
PLoS One, 2020, 15, 8, e0234169-
Publisher:
  • Public Library Science, San Francisco
Funding / projects:
  • Control of infections by Apicomplexan pathogens: from novel drug targets to prediction (RS-41019)
  • Ministry of Education, Science and Technological Development, Republic of Serbia, Grant no. 200015 (University of Belgrade, Institute for Medical Research) (RS-200015)

DOI: 10.1371/journal.pone.0234169

ISSN: 1932-6203

PubMed: 32810131

WoS: 000563451300045

Scopus: 2-s2.0-85089649739
[ Google Scholar ]
2
URI
http://rimi.imi.bg.ac.rs/handle/123456789/1046
Collections
  • Radovi istraživača / Researchers' publications
Institution/Community
Institut za medicinska istraživanja
TY  - JOUR
AU  - Bauman, Neda M.
AU  - Ilić, Anđelija
AU  - Lijeskić, Olivera
AU  - Uzelac, Aleksandra
AU  - Klun, Ivana
AU  - Srbljanović, Jelena
AU  - Ćirković, Vladimir
AU  - Bobić, Branko
AU  - Štajner, Tijana
AU  - Đurković-Đaković, Olgica
PY  - 2020
UR  - http://rimi.imi.bg.ac.rs/handle/123456789/1046
AB  - Toxoplasma gondiiis an obligate intracellular parasite infecting up to one third of the human population. The central event in the pathogenesis of toxoplasmosis is the conversion of tachyzoites into encysted bradyzoites. A novel approach to analyze the structure ofin vivo-derived tissue cysts may be the increasingly used computational image analysis. The objective of this study was to quantify the geometrical complexity ofT.gondiicysts by morphological, particle, and fractal analysis, as well as to determine if it is impacted by parasite strain, cyst age, and host type. A total of 31 images ofT.gondiibrain cysts of four type-2 strains (Me49, and local isolates BGD1, BGD14, and BGD26) was analyzed using ImageJ software. The parameters of interest included diameter, circularity, packing density (PD), fractal dimension (FD), and lacunarity. Although cyst diameter varied widely, its negative correlation with PD was observed. Circularity was remarkably close to 1, indicating a perfectly round shape of the cysts. PD and FD did not vary among cysts of different strains, age, and derived from mice of different genetic background. Conversely, lacunarity, which is a measure of heterogeneity, was significantly lower for BGD1 strain vs. all other strains, and higher for Me49 vs. BGD14 and BGD26, but did not differ among Me49 cysts of different age, or those derived from genetically different mice. The results indicate a highly uniform structure and occupancy of the differentT.gondiitissue cysts. This study furthers the use of image analysis in describing the structural complexity ofT.gondiicyst morphology, and presents the first application of fractal analysis for this purpose. The presented results show that use of a freely available software is a cost-effective approach to advance automated image scoring forT.gondiicysts.
PB  - Public Library Science, San Francisco
T2  - PLoS One
T1  - Computational image analysis reveals the structural complexity ofToxoplasma gondiitissue cysts
IS  - 8
SP  - e0234169
VL  - 15
DO  - 10.1371/journal.pone.0234169
UR  - conv_4848
ER  - 
@article{
author = "Bauman, Neda M. and Ilić, Anđelija and Lijeskić, Olivera and Uzelac, Aleksandra and Klun, Ivana and Srbljanović, Jelena and Ćirković, Vladimir and Bobić, Branko and Štajner, Tijana and Đurković-Đaković, Olgica",
year = "2020",
abstract = "Toxoplasma gondiiis an obligate intracellular parasite infecting up to one third of the human population. The central event in the pathogenesis of toxoplasmosis is the conversion of tachyzoites into encysted bradyzoites. A novel approach to analyze the structure ofin vivo-derived tissue cysts may be the increasingly used computational image analysis. The objective of this study was to quantify the geometrical complexity ofT.gondiicysts by morphological, particle, and fractal analysis, as well as to determine if it is impacted by parasite strain, cyst age, and host type. A total of 31 images ofT.gondiibrain cysts of four type-2 strains (Me49, and local isolates BGD1, BGD14, and BGD26) was analyzed using ImageJ software. The parameters of interest included diameter, circularity, packing density (PD), fractal dimension (FD), and lacunarity. Although cyst diameter varied widely, its negative correlation with PD was observed. Circularity was remarkably close to 1, indicating a perfectly round shape of the cysts. PD and FD did not vary among cysts of different strains, age, and derived from mice of different genetic background. Conversely, lacunarity, which is a measure of heterogeneity, was significantly lower for BGD1 strain vs. all other strains, and higher for Me49 vs. BGD14 and BGD26, but did not differ among Me49 cysts of different age, or those derived from genetically different mice. The results indicate a highly uniform structure and occupancy of the differentT.gondiitissue cysts. This study furthers the use of image analysis in describing the structural complexity ofT.gondiicyst morphology, and presents the first application of fractal analysis for this purpose. The presented results show that use of a freely available software is a cost-effective approach to advance automated image scoring forT.gondiicysts.",
publisher = "Public Library Science, San Francisco",
journal = "PLoS One",
title = "Computational image analysis reveals the structural complexity ofToxoplasma gondiitissue cysts",
number = "8",
pages = "e0234169",
volume = "15",
doi = "10.1371/journal.pone.0234169",
url = "conv_4848"
}
Bauman, N. M., Ilić, A., Lijeskić, O., Uzelac, A., Klun, I., Srbljanović, J., Ćirković, V., Bobić, B., Štajner, T.,& Đurković-Đaković, O.. (2020). Computational image analysis reveals the structural complexity ofToxoplasma gondiitissue cysts. in PLoS One
Public Library Science, San Francisco., 15(8), e0234169.
https://doi.org/10.1371/journal.pone.0234169
conv_4848
Bauman NM, Ilić A, Lijeskić O, Uzelac A, Klun I, Srbljanović J, Ćirković V, Bobić B, Štajner T, Đurković-Đaković O. Computational image analysis reveals the structural complexity ofToxoplasma gondiitissue cysts. in PLoS One. 2020;15(8):e0234169.
doi:10.1371/journal.pone.0234169
conv_4848 .
Bauman, Neda M., Ilić, Anđelija, Lijeskić, Olivera, Uzelac, Aleksandra, Klun, Ivana, Srbljanović, Jelena, Ćirković, Vladimir, Bobić, Branko, Štajner, Tijana, Đurković-Đaković, Olgica, "Computational image analysis reveals the structural complexity ofToxoplasma gondiitissue cysts" in PLoS One, 15, no. 8 (2020):e0234169,
https://doi.org/10.1371/journal.pone.0234169 .,
conv_4848 .

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